STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL61257.1COG0463 Glycosyltransferases involved in cell wall biogenesis. (253 aa)    
Predicted Functional Partners:
EDL61256.1
COG3222 Uncharacterized protein conserved in bacteria.
 
     0.947
EDL61259.1
Radical SAM domain protein; COG0535 Predicted Fe-S oxidoreductases.
 
     0.855
EDL61258.1
COG0500 SAM-dependent methyltransferases.
 
    0.812
YdjZ
Possible pyridine nucleotide-disulphide oxidoreductase.
 
     0.765
EDL56380.1
Hypothetical protein; COG3000 Sterol desaturase.
  
 
   0.667
EDL61702.1
COG4446 Uncharacterized protein conserved in bacteria.
  
     0.633
MerA
Mercuric reductase; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
  
     0.552
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.