STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL59509.1COG4329 Predicted membrane protein. (166 aa)    
Predicted Functional Partners:
EDL59508.1
Hypothetical protein.
       0.788
EDL56781.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
     0.735
EDL59510.1
YeeE/YedE family protein; COG2391 Predicted transporter component.
       0.610
EDL59511.1
Hypothetical protein; COG2391 Predicted transporter component.
       0.610
Fdm
COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
     0.514
Blh_1
COG3453 Uncharacterized protein conserved in bacteria.
       0.498
EDL56763.1
Hypothetical protein; COG5637 Predicted integral membrane protein.
  
     0.495
EDL56521.1
Hypothetical protein; COG1145 Ferredoxin.
  
     0.470
CypC
Fatty acid alpha hydroxylase, cytochrome P450; COG2124 Cytochrome P450.
  
     0.456
EDL62148.1
COG3871 Uncharacterized stress protein (general stress protein 26).
  
     0.455
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.