Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BarA_2 | EDL59525.1 | PM8797T_15426 | PM8797T_04200 | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | Hypothetical protein. | 0.840 |
BarA_2 | EDL60639.1 | PM8797T_15426 | PM8797T_11324 | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | COG1360 Flagellar motor protein. | 0.746 |
BarA_2 | FixL_2 | PM8797T_15426 | PM8797T_27734 | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | Sensor protein fixL; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.998 |
BarA_2 | FlgE | PM8797T_15426 | PM8797T_01409 | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | COG1749 Flagellar hook protein FlgE. | 0.949 |
BarA_2 | FliM | PM8797T_15426 | PM8797T_17479 | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | COG1868 Flagellar motor switch protein. | 0.904 |
BarA_2 | LuxQ_2 | PM8797T_15426 | PM8797T_02909 | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | Probable sensor/response regulator hybrid; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
BarA_2 | LuxQ_3 | PM8797T_15426 | PM8797T_02639 | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | Probable sensor/response regulator hybrid; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
BarA_2 | MotB_1 | PM8797T_15426 | PM8797T_01394 | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | COG1360 Flagellar motor protein. | 0.746 |
BarA_2 | MotB_2 | PM8797T_15426 | PM8797T_13670 | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | OmpA/MotB; COG1360 Flagellar motor protein. | 0.746 |
BarA_2 | RpfC_1 | PM8797T_15426 | PM8797T_25426 | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | Probable sensor/response regulator hybrid; COG2202 FOG: PAS/PAC domain. | 0.999 |
EDL59525.1 | BarA_2 | PM8797T_04200 | PM8797T_15426 | Hypothetical protein. | Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. | 0.840 |
EDL59525.1 | EDL60639.1 | PM8797T_04200 | PM8797T_11324 | Hypothetical protein. | COG1360 Flagellar motor protein. | 0.920 |
EDL59525.1 | FixL_2 | PM8797T_04200 | PM8797T_27734 | Hypothetical protein. | Sensor protein fixL; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.937 |
EDL59525.1 | FlgE | PM8797T_04200 | PM8797T_01409 | Hypothetical protein. | COG1749 Flagellar hook protein FlgE. | 0.975 |
EDL59525.1 | FliM | PM8797T_04200 | PM8797T_17479 | Hypothetical protein. | COG1868 Flagellar motor switch protein. | 0.838 |
EDL59525.1 | LuxQ_2 | PM8797T_04200 | PM8797T_02909 | Hypothetical protein. | Probable sensor/response regulator hybrid; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.977 |
EDL59525.1 | LuxQ_3 | PM8797T_04200 | PM8797T_02639 | Hypothetical protein. | Probable sensor/response regulator hybrid; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.977 |
EDL59525.1 | MotB_1 | PM8797T_04200 | PM8797T_01394 | Hypothetical protein. | COG1360 Flagellar motor protein. | 0.920 |
EDL59525.1 | MotB_2 | PM8797T_04200 | PM8797T_13670 | Hypothetical protein. | OmpA/MotB; COG1360 Flagellar motor protein. | 0.920 |
EDL59525.1 | RpfC_1 | PM8797T_04200 | PM8797T_25426 | Hypothetical protein. | Probable sensor/response regulator hybrid; COG2202 FOG: PAS/PAC domain. | 0.977 |
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