STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WecACOG2148 Sugar transferases involved in lipopolysaccharide synthesis. (295 aa)    
Predicted Functional Partners:
YwqD
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.967
EDL57849.1
Glycosyl transferase, group 2 family protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
   
 0.929
EpsM
COG0110 Acetyltransferase (isoleucine patch superfamily).
 
  
 0.752
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.731
PglF
Polysaccharide biosynthesis protein CapD; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 0.719
TylE
Truncated O-antigen biosynthesis protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.649
BlaR1_11
Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
  
  
 0.648
EDL58537.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.646
WbbL
COG1216 Predicted glycosyltransferases.
  
 0.632
ManC
COG0836 Mannose-1-phosphate guanylyltransferase.
 
  
 0.621
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.