STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL61626.1GGDEF domain-like protein; COG1639 Predicted signal transduction protein. (289 aa)    
Predicted Functional Partners:
BarA_2
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
  
 
 0.834
FlgE
COG1749 Flagellar hook protein FlgE.
 
   0.828
BarA_3
Multi-sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
  
 
 0.807
BarA_1
COG0642 Signal transduction histidine kinase.
  
 
 0.807
EDL58125.1
Hypothetical protein; COG0784 FOG: CheY-like receiver.
  
 
 0.807
FlgI_2
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
    0.795
FlgG_3
COG4786 Flagellar basal body rod protein.
 
   0.792
FlgG_2
COG4786 Flagellar basal body rod protein.
 
   0.779
EDL58138.1
Hypothetical protein; COG2198 FOG: HPt domain.
  
 
 0.753
LuxQ_3
Probable sensor/response regulator hybrid; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.750
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.