STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL57600.1Probable integral membrane protein; COG1033 Predicted exporters of the RND superfamily. (971 aa)    
Predicted Functional Partners:
EDL61408.1
Hypothetical protein.
  
     0.691
EDL58677.1
COG0848 Biopolymer transport protein.
  
     0.591
EDL60913.1
Amino acid-binding ACT; COG3830 ACT domain-containing protein.
  
     0.569
EDL60216.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.554
EDL57601.1
Hypothetical protein.
       0.550
EDL60207.1
COG0805 Sec-independent protein secretion pathway component TatC.
  
     0.538
EDL60099.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.534
EDL56807.1
Probable polar flagellar M-ring protein FliF; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
 
     0.496
EDL61424.1
Hypothetical protein.
  
     0.474
EDL56948.1
Hypothetical protein; COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.466
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.