STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL56740.1Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. (1742 aa)    
Predicted Functional Partners:
Gfo_2
Putative NADH-dependent oxidoreductase-possiblyglucose-fructose dependent oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
 
     0.861
EDL59594.1
Nodulin-26; COG2755 Lysophospholipase L1 and related esterases.
  
     0.758
EDL59654.1
Hypothetical protein; COG0820 Predicted Fe-S-cluster redox enzyme.
  
     0.736
EDL56595.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
 
     0.724
EDL59655.1
Hypothetical protein.
  
     0.715
EDL59653.1
Putative WD-repeat containing protein; COG2319 FOG: WD40 repeat.
  
    0.704
EDL61827.1
COG3828 Uncharacterized protein conserved in bacteria.
 
     0.688
EDL59744.1
Hypothetical protein.
     0.675
IolG_2
Probable streptomycin biosynthesis protein strI; COG0673 Predicted dehydrogenases and related proteins.
  
     0.646
EDL57201.1
Hypothetical protein.
  
     0.641
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.