Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDL56100.1 | EDL56305.1 | PM8797T_25955 | PM8797T_24231 | Hypothetical protein; COG0699 Predicted GTPases (dynamin-related). | Hypothetical protein. | 0.500 |
EDL56100.1 | EDL56955.1 | PM8797T_25955 | PM8797T_13590 | Hypothetical protein; COG0699 Predicted GTPases (dynamin-related). | Hypothetical protein. | 0.828 |
EDL56100.1 | EDL58555.1 | PM8797T_25955 | PM8797T_06992 | Hypothetical protein; COG0699 Predicted GTPases (dynamin-related). | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.481 |
EDL56100.1 | RluB | PM8797T_25955 | PM8797T_25821 | Hypothetical protein; COG0699 Predicted GTPases (dynamin-related). | Ribosomal large subunit pseudouridine synthase B; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. | 0.500 |
EDL56100.1 | cmk | PM8797T_25955 | PM8797T_30347 | Hypothetical protein; COG0699 Predicted GTPases (dynamin-related). | COG0283 Cytidylate kinase. | 0.720 |
EDL56305.1 | EDL56100.1 | PM8797T_24231 | PM8797T_25955 | Hypothetical protein. | Hypothetical protein; COG0699 Predicted GTPases (dynamin-related). | 0.500 |
EDL56305.1 | EDL58555.1 | PM8797T_24231 | PM8797T_06992 | Hypothetical protein. | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.496 |
EDL56305.1 | cmk | PM8797T_24231 | PM8797T_30347 | Hypothetical protein. | COG0283 Cytidylate kinase. | 0.706 |
EDL56305.1 | der | PM8797T_24231 | PM8797T_04875 | Hypothetical protein. | Probable GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.500 |
EDL56955.1 | EDL56100.1 | PM8797T_13590 | PM8797T_25955 | Hypothetical protein. | Hypothetical protein; COG0699 Predicted GTPases (dynamin-related). | 0.828 |
EDL56955.1 | EDL58555.1 | PM8797T_13590 | PM8797T_06992 | Hypothetical protein. | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.496 |
EDL56955.1 | cmk | PM8797T_13590 | PM8797T_30347 | Hypothetical protein. | COG0283 Cytidylate kinase. | 0.706 |
EDL56955.1 | der | PM8797T_13590 | PM8797T_04875 | Hypothetical protein. | Probable GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.500 |
EDL58554.1 | EDL58555.1 | PM8797T_06987 | PM8797T_06992 | Hypothetical protein; COG0457 FOG: TPR repeat. | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.773 |
EDL58555.1 | EDL56100.1 | PM8797T_06992 | PM8797T_25955 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Hypothetical protein; COG0699 Predicted GTPases (dynamin-related). | 0.481 |
EDL58555.1 | EDL56305.1 | PM8797T_06992 | PM8797T_24231 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.496 |
EDL58555.1 | EDL56955.1 | PM8797T_06992 | PM8797T_13590 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.496 |
EDL58555.1 | EDL58554.1 | PM8797T_06992 | PM8797T_06987 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Hypothetical protein; COG0457 FOG: TPR repeat. | 0.773 |
EDL58555.1 | RluB | PM8797T_06992 | PM8797T_25821 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Ribosomal large subunit pseudouridine synthase B; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. | 0.496 |
EDL58555.1 | ScpA | PM8797T_06992 | PM8797T_32185 | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.995 |
page 1 of 3