STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VspIMType II adenine specific methyltransferase; COG0286 Type I restriction-modification system methyltransferase subunit. (549 aa)    
Predicted Functional Partners:
EDL60865.1
Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
       0.773
MprF_1
Hypothetical protein; COG0392 Predicted integral membrane protein.
   
    0.751
CobB
COG0846 NAD-dependent protein deacetylases, SIR2 family.
   
    0.633
EDL60348.1
Hypothetical protein.
   
    0.633
EDL59105.1
Hypothetical protein; COG1678 Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.627
BlaI_1
Probable Penicillinase repressor; COG3682 Predicted transcriptional regulator.
  
    0.558
BlaR1_1
Probable regulatory protein blaR1; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
  
    0.558
EDL60863.1
Putative secreted protein.
       0.542
YtrA_2
Transcription regulator GntR related protein ytrA; COG1725 Predicted transcriptional regulators.
   
    0.424
YtrA_1
Transcriptional regulator gntR family protein; COG1725 Predicted transcriptional regulators.
   
    0.424
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.