STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PhoP_2Alkaline phosphatase synthesis response regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (129 aa)    
Predicted Functional Partners:
PhoR_2
COG0642 Signal transduction histidine kinase.
 
  
  0.990
PleD_1
Putative response regulator; COG0784 FOG: CheY-like receiver.
  
  
  0.976
SrrB
COG0642 Signal transduction histidine kinase.
 
  
  0.974
PhoR_1
Sensory box sensor histidine kinase; COG0642 Signal transduction histidine kinase.
 
  
 0.972
PhoB
Phosphate regulon response regulator PhoB; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
  
 
0.922
CheA
CheA Signal Transduction Histidine Kinases (STHK); COG0643 Chemotaxis protein histidine kinase and related kinases.
  
 
 0.870
FliM
COG1868 Flagellar motor switch protein.
  
 
 0.808
RpfC_1
Probable sensor/response regulator hybrid; COG2202 FOG: PAS/PAC domain.
 
 
 0.800
PleC
COG0642 Signal transduction histidine kinase.
 
 
 
 0.781
LuxQ_10
COG0642 Signal transduction histidine kinase.
 
 
 
 0.777
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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