STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL60945.1Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases. (339 aa)    
Predicted Functional Partners:
EDL55981.1
Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
    0.749
EDL55980.1
Hypothetical protein.
  
     0.722
EDL58798.1
COG0673 Predicted dehydrogenases and related proteins.
  
    0.670
Pkn1_2
Hypothetical protein.
  
     0.649
EDL56750.1
Hypothetical protein.
  
     0.645
EDL56616.1
Hypothetical protein.
  
     0.626
EDL61251.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.615
IolG_11
Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
    0.608
IolG_2
Probable streptomycin biosynthesis protein strI; COG0673 Predicted dehydrogenases and related proteins.
  
    0.605
EDL58784.1
Putative multi-domain protein.
  
     0.588
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.