STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmp_2HMP; COG1017 Hemoglobin-like flavoprotein; Belongs to the globin family. (255 aa)    
Predicted Functional Partners:
EDL62131.1
Hypothetical protein.
  
  
 0.925
Hmp_1
COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
  
 0.803
NasD
Nitrite reductase (NAD(P)H) large subunit; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.769
EDL56029.1
Hypothetical protein; COG1959 Predicted transcriptional regulator.
     
 0.666
NsrR_2
Hypothetical protein; COG1959 Predicted transcriptional regulator.
 
   
 0.632
EDL60006.1
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
  
  
 0.516
HcaC_2
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
  
 0.516
GlbO
Hemoglobin-like protein; COG2346 Truncated hemoglobins.
 
  
 0.503
BdlA
Chemotaxis sensory transducer; COG2202 FOG: PAS/PAC domain.
  
  
 0.487
BarA_2
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
  
  
 0.483
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.