STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL56573.1COG0811 Biopolymer transport proteins. (218 aa)    
Predicted Functional Partners:
EDL56574.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.807
Vgb_2
Hypothetical protein.
  
 
 0.756
EDL56491.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.577
EDL62374.1
Hypothetical protein.
  
  
 0.545
EDL60514.1
COG0848 Biopolymer transport protein.
  
   0.523
EDL58677.1
COG0848 Biopolymer transport protein.
  
   0.523
EDL58678.1
COG0848 Biopolymer transport protein.
  
   0.523
EDL60071.1
Hypothetical protein; COG2995 Uncharacterized paraquat-inducible protein A.
  
   0.523
EDL58165.1
COG0848 Biopolymer transport protein.
  
   0.523
EDL58166.1
COG0848 Biopolymer transport protein.
  
   0.523
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.