STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL60508.1TnpC protein; COG3436 Transposase and inactivated derivatives. (507 aa)    
Predicted Functional Partners:
EDL60507.1
Transposase orf1, IS66 family protein; COG3436 Transposase and inactivated derivatives.
 
     0.889
EDL60661.1
Transposase orf1, IS66 family protein; COG3436 Transposase and inactivated derivatives.
  
     0.775
EDL56060.1
Transposase orf1, IS66 family protein; COG3436 Transposase and inactivated derivatives.
  
     0.775
EDL62236.1
COG3436 Transposase and inactivated derivatives.
  
     0.775
EDL62270.1
Probable transpoase helper protein; COG3436 Transposase and inactivated derivatives.
  
     0.775
EDL62353.1
Probable transpoase helper protein; COG3436 Transposase and inactivated derivatives.
  
     0.775
EDL56585.1
COG3436 Transposase and inactivated derivatives.
  
     0.684
EDL60506.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
       0.528
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.