STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL60528.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
EDL60532.1
Fimbrial assembly protein PilC; COG1459 Type II secretory pathway, component PulF.
  
    0.729
EDL60529.1
Hypothetical protein; COG3156 Type II secretory pathway, component PulK.
       0.697
EDL60530.1
Hypothetical protein.
       0.674
EDL60531.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
       0.674
GspF_2
Type II secretion system protein; COG1459 Type II secretory pathway, component PulF.
  
    0.651
EpsF_8
MSHA biogenesis protein MshG; COG1459 Type II secretory pathway, component PulF.
  
    0.651
XcpT_61
Hypothetical protein.
 
    
0.634
EDL58224.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.625
EDL59037.1
COG4972 Tfp pilus assembly protein, ATPase PilM.
  
     0.574
SigA_3
Sigma-70 factor; COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); Belongs to the sigma-70 factor family.
  
     0.561
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.