Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDL55980.1 | EDL60580.1 | PM8797T_23651 | PM8797T_11029 | Hypothetical protein. | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | 0.448 |
EDL55980.1 | EDL61628.1 | PM8797T_23651 | PM8797T_04985 | Hypothetical protein. | D-threonine aldolase, metal-activated pyridoxal enzyme; COG3616 Predicted amino acid aldolase or racemase. | 0.587 |
EDL57534.1 | EDL60580.1 | PM8797T_32190 | PM8797T_11029 | COG2071 Predicted glutamine amidotransferases. | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | 0.422 |
EDL58394.1 | EDL60580.1 | PM8797T_27100 | PM8797T_11029 | Hypothetical protein; COG0457 FOG: TPR repeat. | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | 0.405 |
EDL60579.1 | EDL60580.1 | PM8797T_11024 | PM8797T_11029 | Hypothetical protein; COG2363 Uncharacterized small membrane protein. | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | 0.557 |
EDL60579.1 | YraA_3 | PM8797T_11024 | PM8797T_11019 | Hypothetical protein; COG2363 Uncharacterized small membrane protein. | Hypothetical protein; COG0693 Putative intracellular protease/amidase. | 0.564 |
EDL60580.1 | EDL55980.1 | PM8797T_11029 | PM8797T_23651 | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | Hypothetical protein. | 0.448 |
EDL60580.1 | EDL57534.1 | PM8797T_11029 | PM8797T_32190 | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | COG2071 Predicted glutamine amidotransferases. | 0.422 |
EDL60580.1 | EDL58394.1 | PM8797T_11029 | PM8797T_27100 | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | Hypothetical protein; COG0457 FOG: TPR repeat. | 0.405 |
EDL60580.1 | EDL60579.1 | PM8797T_11029 | PM8797T_11024 | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | Hypothetical protein; COG2363 Uncharacterized small membrane protein. | 0.557 |
EDL60580.1 | EDL60581.1 | PM8797T_11029 | PM8797T_11034 | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | Hypothetical protein; COG1196 Chromosome segregation ATPases. | 0.437 |
EDL60580.1 | EDL61628.1 | PM8797T_11029 | PM8797T_04985 | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | D-threonine aldolase, metal-activated pyridoxal enzyme; COG3616 Predicted amino acid aldolase or racemase. | 0.620 |
EDL60580.1 | YraA_3 | PM8797T_11029 | PM8797T_11019 | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | Hypothetical protein; COG0693 Putative intracellular protease/amidase. | 0.419 |
EDL60581.1 | EDL60580.1 | PM8797T_11034 | PM8797T_11029 | Hypothetical protein; COG1196 Chromosome segregation ATPases. | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | 0.437 |
EDL61628.1 | EDL55980.1 | PM8797T_04985 | PM8797T_23651 | D-threonine aldolase, metal-activated pyridoxal enzyme; COG3616 Predicted amino acid aldolase or racemase. | Hypothetical protein. | 0.587 |
EDL61628.1 | EDL60580.1 | PM8797T_04985 | PM8797T_11029 | D-threonine aldolase, metal-activated pyridoxal enzyme; COG3616 Predicted amino acid aldolase or racemase. | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | 0.620 |
YraA_3 | EDL60579.1 | PM8797T_11019 | PM8797T_11024 | Hypothetical protein; COG0693 Putative intracellular protease/amidase. | Hypothetical protein; COG2363 Uncharacterized small membrane protein. | 0.564 |
YraA_3 | EDL60580.1 | PM8797T_11019 | PM8797T_11029 | Hypothetical protein; COG0693 Putative intracellular protease/amidase. | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | 0.419 |