Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CysE_2 | EDL61304.1 | PM8797T_12413 | PM8797T_12408 | Serine acetyltransferase, plasmid; COG1045 Serine acetyltransferase. | Hypothetical protein. | 0.551 |
CysE_2 | EDL61306.1 | PM8797T_12413 | PM8797T_12418 | Serine acetyltransferase, plasmid; COG1045 Serine acetyltransferase. | Hypothetical protein. | 0.613 |
CysE_2 | EDL61308.1 | PM8797T_12413 | PM8797T_12428 | Serine acetyltransferase, plasmid; COG1045 Serine acetyltransferase. | Hypothetical protein. | 0.418 |
CysE_2 | RpfG_4 | PM8797T_12413 | PM8797T_12423 | Serine acetyltransferase, plasmid; COG1045 Serine acetyltransferase. | HD-GYP domain (HD superfamily hydrolase); COG2206 HD-GYP domain. | 0.413 |
EDL61304.1 | CysE_2 | PM8797T_12408 | PM8797T_12413 | Hypothetical protein. | Serine acetyltransferase, plasmid; COG1045 Serine acetyltransferase. | 0.551 |
EDL61304.1 | EDL61306.1 | PM8797T_12408 | PM8797T_12418 | Hypothetical protein. | Hypothetical protein. | 0.446 |
EDL61306.1 | CysE_2 | PM8797T_12418 | PM8797T_12413 | Hypothetical protein. | Serine acetyltransferase, plasmid; COG1045 Serine acetyltransferase. | 0.613 |
EDL61306.1 | EDL61304.1 | PM8797T_12418 | PM8797T_12408 | Hypothetical protein. | Hypothetical protein. | 0.446 |
EDL61306.1 | EDL61308.1 | PM8797T_12418 | PM8797T_12428 | Hypothetical protein. | Hypothetical protein. | 0.507 |
EDL61306.1 | RpfG_4 | PM8797T_12418 | PM8797T_12423 | Hypothetical protein. | HD-GYP domain (HD superfamily hydrolase); COG2206 HD-GYP domain. | 0.507 |
EDL61308.1 | CysE_2 | PM8797T_12428 | PM8797T_12413 | Hypothetical protein. | Serine acetyltransferase, plasmid; COG1045 Serine acetyltransferase. | 0.418 |
EDL61308.1 | EDL61306.1 | PM8797T_12428 | PM8797T_12418 | Hypothetical protein. | Hypothetical protein. | 0.507 |
EDL61308.1 | RpfG_4 | PM8797T_12428 | PM8797T_12423 | Hypothetical protein. | HD-GYP domain (HD superfamily hydrolase); COG2206 HD-GYP domain. | 0.773 |
RpfG_4 | CysE_2 | PM8797T_12423 | PM8797T_12413 | HD-GYP domain (HD superfamily hydrolase); COG2206 HD-GYP domain. | Serine acetyltransferase, plasmid; COG1045 Serine acetyltransferase. | 0.413 |
RpfG_4 | EDL61306.1 | PM8797T_12423 | PM8797T_12418 | HD-GYP domain (HD superfamily hydrolase); COG2206 HD-GYP domain. | Hypothetical protein. | 0.507 |
RpfG_4 | EDL61308.1 | PM8797T_12423 | PM8797T_12428 | HD-GYP domain (HD superfamily hydrolase); COG2206 HD-GYP domain. | Hypothetical protein. | 0.773 |