STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL61316.1Probable TolB protein (Precursor); COG0823 Periplasmic component of the Tol biopolymer transport system. (309 aa)    
Predicted Functional Partners:
Vgb_2
Hypothetical protein.
   
 
 0.884
EDL59854.1
Hypothetical protein.
 
   0.827
ndk
Nucleoside diphosphate kinase (NDK); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.661
EDL61315.1
Probable TolB protein (Precursor); COG0823 Periplasmic component of the Tol biopolymer transport system.
 
    
0.651
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 0.645
EDL60372.1
Dimethylaniline monooxygenase (N-oxide forming); COG2072 Predicted flavoprotein involved in K+ transport.
    
   0.628
EDL56491.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 
 
 0.624
EDL61317.1
Hypothetical protein.
       0.608
AqpZ
MIP family channel protein; COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.607
EDL57506.1
Hypothetical protein; COG1160 Predicted GTPases.
   
 0.595
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.