STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL61524.1Hypothetical protein. (522 aa)    
Predicted Functional Partners:
EDL61521.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
       0.682
EDL61522.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
       0.682
EDL61523.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
       0.682
EDL61520.1
Hypothetical protein.
       0.602
EDL61525.1
Hypothetical protein.
       0.596
EpsF_7
Type IV fimbrial assembly protein PilC; COG1459 Type II secretory pathway, component PulF.
  
    0.451
EDL61518.1
Type IV fimbrial assembly protein PilB; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
   0.406
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.