STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UbiE_5Hypothetical protein; COG0500 SAM-dependent methyltransferases. (274 aa)    
Predicted Functional Partners:
UbiE_4
2-heptaprenyl-1,4-naphthoquinone methyltransferase; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis.
  
 
   0.696
UbiE_6
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
 
   0.565
EDL62100.1
Hypothetical protein; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase.
   
   0.552
RebM_1
Cyclopropane-fatty-acyl-phospholipid synthase family protein; COG0500 SAM-dependent methyltransferases.
 
     0.521
EDL60350.1
Hypothetical protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
  
 
   0.428
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
  
 
   0.403
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.