STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NrfACOG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; Belongs to the cytochrome c-552 family. (455 aa)    
Predicted Functional Partners:
NrfH
COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit.
 
 0.998
NasD
Nitrite reductase (NAD(P)H) large subunit; COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.920
HcaC_1
Rieske (2Fe-2S) oxidoreductase; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
 
  0.903
GlnA_1
COG0174 Glutamine synthetase.
     
 0.903
GdhA_2
Glutamate dehydrogenase; COG0784 FOG: CheY-like receiver.
     
 0.903
GdhA_1
COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.903
GlnA_4
COG0174 Glutamine synthetase.
     
 0.903
GlnA_3
COG0174 Glutamine synthetase.
     
 0.903
GlnA_2
Glutamine synthetase, type III; COG3968 Uncharacterized protein related to glutamine synthetase.
     
  0.900
EDL56553.1
Putative nitrilase; COG0388 Predicted amidohydrolase.
     
  0.900
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.