STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EutNHypothetical protein; COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein. (86 aa)    
Predicted Functional Partners:
EDL58722.1
Hypothetical protein; COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.954
PduA
Probable ethanolamine utilization protein EutM; COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.951
SucD_3
Ethanolamine utilization protein EutE; COG1012 NAD-dependent aldehyde dehydrogenases.
 
   
 0.908
CcmL
Probable ethanolamine utilization protein EutN; COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
     0.885
MtnB
L-fuculose-phosphate aldolase; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
 
     0.733
EDL58716.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
       0.723
PduL
Hypothetical protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
   
 0.708
EDL58715.1
Hypothetical protein; COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein.
       0.683
Ldh
COG0039 Malate/lactate dehydrogenases; Belongs to the LDH/MDH superfamily.
       0.516
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
     0.480
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.