STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL58786.1Hypothetical protein; COG0457 FOG: TPR repeat. (387 aa)    
Predicted Functional Partners:
EDL60053.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.555
MoeB_1
UBA/THIF-type NAD/FAD binding fold protein; COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily.
  
  0.523
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.485
EDL58328.1
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
     0.463
HtpG_2
COG0326 Molecular chaperone, HSP90 family.
   
  0.430
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
   
  0.430
PgaC_1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
   0.425
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
 
     0.423
EDL61988.1
COG0845 Membrane-fusion protein.
  
 
   0.423
SdcS_1
COG0471 Di- and tricarboxylate transporters.
  
     0.416
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.