STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL59893.1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
EDL59892.1
COG2268 Uncharacterized protein conserved in bacteria.
       0.773
EDL62438.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
     0.620
EDL61174.1
Hypothetical protein; COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase.
  
     0.618
EDL56424.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.615
EDL62435.1
COG5426 Uncharacterized membrane protein.
  
     0.612
EDL57199.1
Probable serine/threonine protein kinase related protein; COG1520 FOG: WD40-like repeat.
  
     0.595
EDL62441.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.554
EDL59890.1
Hypothetical protein.
       0.545
EDL59891.1
Hypothetical protein.
      
0.545
EDL59274.1
Hypothetical protein.
  
     0.496
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.