STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL59947.1Probable magnesium protoporphyrin chelatase; COG1239 Mg-chelatase subunit ChlI. (468 aa)    
Predicted Functional Partners:
EDL59948.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
    0.934
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
 
 0.931
HemY
Protoporphyrinogen IX and coproporphyrinogen III oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.925
EDL60670.1
Hypothetical protein.
  
 
 0.624
EDL58655.1
BatA; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
 
 0.624
EDL58656.1
BatB; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
 
 0.624
EDL57275.1
Hypothetical protein.
  
 
 0.624
EDL60077.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
 
 0.624
EDL58170.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
 
 0.624
EDL62254.1
Hypothetical protein; COG1240 Mg-chelatase subunit ChlD.
  
 
 0.624
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.