STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL60065.1Hypothetical protein. (419 aa)    
Predicted Functional Partners:
EDL60066.1
Type II secretion system protein E; COG4962 Flp pilus assembly protein, ATPase CpaF.
       0.755
EDL60067.1
Putative tight adherence tadb-related transmembrane protein; COG4965 Flp pilus assembly protein TadB.
       0.750
EDL60064.1
COG3745 Flp pilus assembly protein CpaB.
       0.618
EDL60068.1
COG2064 Flp pilus assembly protein TadC.
       0.597
EDL60063.1
COG4961 Flp pilus assembly protein TadG.
       0.411
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.