STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UxuAD-mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (343 aa)    
Predicted Functional Partners:
GarD
COG2721 Altronate dehydratase.
 
 
 0.971
KdgK_3
PfkB; COG0524 Sugar kinases, ribokinase family.
 
  
 0.948
UxuB
D-mannonate oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 0.930
UxaC
Hypothetical protein; COG1904 Glucuronate isomerase.
 
  
 0.884
RpiB
COG0698 Ribose 5-phosphate isomerase RpiB.
   
 
  0.821
YwlF
Ribose 5-phosphate epimerase (pentose phosphate); COG0698 Ribose 5-phosphate isomerase RpiB.
   
 
  0.821
HxlA
D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-1); COG0269 3-hexulose-6-phosphate synthase and related proteins.
     
 0.811
GndA
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
  0.800
Rpe
COG0036 Pentose-5-phosphate-3-epimerase.
     
  0.800
KdgA
Hypothetical protein; COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
 
   
 0.799
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.