STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL56233.1COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen. (618 aa)    
Predicted Functional Partners:
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
    
  0.900
HsdR_2
DEAD/DEAH box helicase-like protein; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
  
    0.797
EDL60894.1
Hypothetical protein.
  
    0.730
EDL58250.1
Type I restriction enzyme specificity protein; COG0732 Restriction endonuclease S subunits.
  
    0.700
HsdS
COG0732 Restriction endonuclease S subunits.
  
    0.700
EDL61216.1
Hypothetical protein; COG3593 Predicted ATP-dependent endonuclease of the OLD family.
  
    0.699
EDL56323.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
    0.699
EDL62153.1
Hypothetical protein.
  
    0.435
EDL62154.1
Hypothetical protein; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
    0.435
EDL61948.1
Hypothetical protein; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold.
  
     0.413
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.