STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NedA_5COG4409 Neuraminidase (sialidase). (358 aa)    
Predicted Functional Partners:
EDL58349.1
Hypothetical protein; COG4692 Predicted neuraminidase (sialidase).
 
     0.761
NedA_3
COG4409 Neuraminidase (sialidase).
  
     0.735
EDL57244.1
COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
  
     0.731
EDL58007.1
Hypothetical protein; COG4692 Predicted neuraminidase (sialidase).
 
     0.703
EDL57862.1
Hypothetical protein; COG4692 Predicted neuraminidase (sialidase).
  
     0.696
EDL61189.1
Putative sugar transporter; COG0477 Permeases of the major facilitator superfamily.
 
     0.670
EDL57163.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
     0.650
EDL59090.1
Hypothetical protein; COG0060 Isoleucyl-tRNA synthetase.
  
     0.646
EDL58933.1
Hypothetical protein; COG1061 DNA or RNA helicases of superfamily II.
  
    0.640
EDL57949.1
Probable large, multifunctional secreted protein; COG3828 Uncharacterized protein conserved in bacteria.
  
    0.639
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.