Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AdhB | EDL56482.1 | PM8797T_21413 | PM8797T_19385 | COG1454 Alcohol dehydrogenase, class IV. | Hypothetical protein; COG0366 Glycosidases. | 0.430 |
EDL56480.1 | EDL56482.1 | PM8797T_19375 | PM8797T_19385 | Hypothetical protein. | Hypothetical protein; COG0366 Glycosidases. | 0.441 |
EDL56480.1 | NedA_5 | PM8797T_19375 | PM8797T_19380 | Hypothetical protein. | COG4409 Neuraminidase (sialidase). | 0.565 |
EDL56482.1 | AdhB | PM8797T_19385 | PM8797T_21413 | Hypothetical protein; COG0366 Glycosidases. | COG1454 Alcohol dehydrogenase, class IV. | 0.430 |
EDL56482.1 | EDL56480.1 | PM8797T_19385 | PM8797T_19375 | Hypothetical protein; COG0366 Glycosidases. | Hypothetical protein. | 0.441 |
EDL56482.1 | EDL56483.1 | PM8797T_19385 | PM8797T_19390 | Hypothetical protein; COG0366 Glycosidases. | Hypothetical protein; COG1802 Transcriptional regulators. | 0.505 |
EDL56482.1 | Mdh_1 | PM8797T_19385 | PM8797T_30721 | Hypothetical protein; COG0366 Glycosidases. | COG1454 Alcohol dehydrogenase, class IV. | 0.430 |
EDL56482.1 | NedA_5 | PM8797T_19385 | PM8797T_19380 | Hypothetical protein; COG0366 Glycosidases. | COG4409 Neuraminidase (sialidase). | 0.591 |
EDL56483.1 | EDL56482.1 | PM8797T_19390 | PM8797T_19385 | Hypothetical protein; COG1802 Transcriptional regulators. | Hypothetical protein; COG0366 Glycosidases. | 0.505 |
Mdh_1 | EDL56482.1 | PM8797T_30721 | PM8797T_19385 | COG1454 Alcohol dehydrogenase, class IV. | Hypothetical protein; COG0366 Glycosidases. | 0.430 |
NedA_5 | EDL56480.1 | PM8797T_19380 | PM8797T_19375 | COG4409 Neuraminidase (sialidase). | Hypothetical protein. | 0.565 |
NedA_5 | EDL56482.1 | PM8797T_19380 | PM8797T_19385 | COG4409 Neuraminidase (sialidase). | Hypothetical protein; COG0366 Glycosidases. | 0.591 |