STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MshD_2Acetyltransferase, GNAT family protein; COG3393 Predicted acetyltransferase. (267 aa)    
Predicted Functional Partners:
EDL57042.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
       0.465
EDL60143.1
Hypothetical protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
    0.451
EDL60250.1
Band 7 protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
    0.451
FtsH3_2
Hypothetical protein; COG0464 ATPases of the AAA+ class.
   
    0.418
FtsH2
Possible AAA ATPase family protein; COG0464 ATPases of the AAA+ class.
   
    0.418
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.