STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AtsA_40COG3119 Arylsulfatase A and related enzymes. (510 aa)    
Predicted Functional Partners:
EDL59906.1
Glycosyl hydrolase, BNR repeat; COG4409 Neuraminidase (sialidase).
  
  
  0.694
NedA_4
COG4409 Neuraminidase (sialidase).
  
 
  0.694
NedA_3
COG4409 Neuraminidase (sialidase).
  
 
  0.691
NedA_2
COG4409 Neuraminidase (sialidase).
   
 
  0.656
NedA_1
COG4409 Neuraminidase (sialidase).
   
 
  0.656
NanB
Probable sialidase; COG1413 FOG: HEAT repeat.
   
 
  0.656
EDL59143.1
COG4409 Neuraminidase (sialidase).
    
  0.651
EDL59883.1
COG4409 Neuraminidase (sialidase).
    
  0.651
MoeZ_2
Probable molybdopterin-synthase sulfurylase; COG0607 Rhodanese-related sulfurtransferase.
       0.613
AtsA_39
COG3119 Arylsulfatase A and related enzymes.
 
    
0.599
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.