STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TagHABC O-antigen/lipopolysaccharide exporter, ATPase subunit; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (454 aa)    
Predicted Functional Partners:
TagG
ABC-2; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 0.999
TylE
Truncated O-antigen biosynthesis protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.971
EDL58917.1
Hypothetical protein.
     
 0.823
WbbL
COG1216 Predicted glycosyltransferases.
 
  
 0.811
EDL58537.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.806
BlaR1_11
Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
  
  
 0.806
EDL58918.1
Rhamnosyltransferase; COG1216 Predicted glycosyltransferases.
 
  
 0.746
EDL61449.1
COG1040 Predicted amidophosphoribosyltransferases.
   
    0.742
EDL62176.1
Glycosyl transferase, family 2; COG0500 SAM-dependent methyltransferases.
 
  
 0.641
EDL60234.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.631
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.