Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DpnA | EDL55991.1 | PM8797T_21643 | PM8797T_32500 | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. | COG0045 Succinyl-CoA synthetase, beta subunit. | 0.443 |
| DpnA | EDL61905.1 | PM8797T_21643 | PM8797T_21638 | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. | Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. | 0.572 |
| DpnA | UspE | PM8797T_21643 | PM8797T_21648 | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. | COG0589 Universal stress protein UspA and related nucleotide-binding proteins. | 0.418 |
| DpnA | sucC | PM8797T_21643 | PM8797T_17272 | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. | succinyl-CoA synthetase (beta subunit); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.443 |
| DpnA | sucD | PM8797T_21643 | PM8797T_17267 | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. | Putative succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.548 |
| EDL55991.1 | DpnA | PM8797T_32500 | PM8797T_21643 | COG0045 Succinyl-CoA synthetase, beta subunit. | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.443 |
| EDL55991.1 | sucD | PM8797T_32500 | PM8797T_17267 | COG0045 Succinyl-CoA synthetase, beta subunit. | Putative succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.994 |
| EDL61905.1 | DpnA | PM8797T_21638 | PM8797T_21643 | Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.572 |
| UspE | DpnA | PM8797T_21648 | PM8797T_21643 | COG0589 Universal stress protein UspA and related nucleotide-binding proteins. | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.418 |
| sucC | DpnA | PM8797T_17272 | PM8797T_21643 | succinyl-CoA synthetase (beta subunit); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.443 |
| sucC | sucD | PM8797T_17272 | PM8797T_17267 | succinyl-CoA synthetase (beta subunit); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | Putative succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.999 |
| sucD | DpnA | PM8797T_17267 | PM8797T_21643 | Putative succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.548 |
| sucD | EDL55991.1 | PM8797T_17267 | PM8797T_32500 | Putative succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | COG0045 Succinyl-CoA synthetase, beta subunit. | 0.994 |
| sucD | sucC | PM8797T_17267 | PM8797T_17272 | Putative succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | succinyl-CoA synthetase (beta subunit); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.999 |