STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL62035.1COG0778 Nitroreductase. (222 aa)    
Predicted Functional Partners:
YbhF_7
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
  
 0.793
DrrB
Probable membrane protein; COG0842 ABC-type multidrug transport system, permease component.
  
  
 0.682
EDL59635.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.581
EDL58520.1
Probable sodium extrusion protein NatB; COG1668 ABC-type Na+ efflux pump, permease component.
  
  
 0.556
EDL58213.1
Probable sodium extrusion protein NatB; COG1668 ABC-type Na+ efflux pump, permease component.
  
  
 0.556
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
 0.530
Aas
AMP-dependent synthetase and ligase; COG0477 Permeases of the major facilitator superfamily.
   
 
 0.499
EDL62034.1
Hypothetical protein.
       0.489
nadE-3
Putative glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
   0.483
MetH
Peptidase S26A, signal peptidase I; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.457
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.