STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL59223.1ACT domain containing transcriptional regulator; Similar to Escherichia coli GcvR. (974 aa)    
Predicted Functional Partners:
EDL59224.1
Hypothetical protein.
   
   0.787
EDL59227.1
Hypothetical protein.
       0.740
EDL59225.1
Hypothetical protein.
       0.727
EDL59226.1
Hypothetical protein.
       0.727
DnaK_4
DnaK protein (heat shock protein), C-terminal region has VWA type A domain; COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
   
   0.584
DnaK_5
DnaK protein (heat shock protein), HSP70/DnaK family; COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
   
   0.518
EDL59222.1
Hypothetical protein.
       0.427
GrpE
COG0576 Molecular chaperone GrpE (heat shock protein).
       0.420
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.