STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL59637.1Hypothetical protein; COG3153 Predicted acetyltransferase. (172 aa)    
Predicted Functional Partners:
YxdL
ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
    0.775
EDL59633.1
Hypothetical protein.
       0.773
EDL59635.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
       0.773
FimA
Adhesion lipoprotein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
       0.773
YjaB_2
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
  
 0.560
EDL59631.1
Hypothetical protein.
       0.508
EDL59632.1
Hypothetical protein.
       0.508
EDL59638.1
Hypothetical protein.
       0.418
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.