STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL59679.1COG4886 Leucine-rich repeat (LRR) protein. (360 aa)    
Predicted Functional Partners:
InlA_1
Putative lipoprotein; COG4886 Leucine-rich repeat (LRR) protein.
  
     0.653
InlA_7
COG4886 Leucine-rich repeat (LRR) protein.
  
     0.642
EDL56220.1
Hypothetical protein.
  
     0.609
EDL58220.1
Hypothetical protein; COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III.
  
     0.602
EDL59678.1
COG3782 Uncharacterized protein conserved in bacteria.
       0.511
EDL59480.1
Cation efflux protein; COG0053 Predicted Co/Zn/Cd cation transporters.
  
     0.482
EDL56426.1
Hypothetical protein.
  
     0.432
EDL59680.1
COG4961 Flp pilus assembly protein TadG.
       0.425
EDL57139.1
Probable auxin-responsive-like protein.
  
     0.424
EDL61218.1
Uncharacterized iron-regulated protein.
  
     0.423
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.