STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KdgR_2Transcriptional regulator (IclR family) protein; COG1414 Transcriptional regulator. (254 aa)    
Predicted Functional Partners:
EDL60831.1
Hypothetical protein.
       0.773
EDL60832.1
COG4102 Uncharacterized protein conserved in bacteria.
       0.732
LutR_4
COG2186 Transcriptional regulators.
 
  
 0.590
LutR_2
Transcriptional regulator, GntR family protein; COG2186 Transcriptional regulators.
 
  
 0.537
LutR_1
GntR-like protein; COG2186 Transcriptional regulators.
 
  
 0.537
LutR_3
Transcriptional regulator (GntR family) protein; COG2186 Transcriptional regulators.
 
  
 0.463
EutB
COG4303 Ethanolamine ammonia-lyase, large subunit.
       0.454
EDL56671.1
Hypothetical protein; Belongs to the D-glutamate cyclase family.
  
    0.416
EDL56880.1
Hypothetical protein.
  
     0.415
EDL57472.1
COG3333 Uncharacterized protein conserved in bacteria.
 
    0.411
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.