STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL57854.1Hypothetical protein. (419 aa)    
Predicted Functional Partners:
TuaC
COG0438 Glycosyltransferase.
       0.785
EpsF_5
Lipopolysaccharide biosynthesis protein, putative; COG0438 Glycosyltransferase.
       0.775
PdaC
Hypothetical protein; COG0726 Predicted xylanase/chitin deacetylase.
       0.771
EDL57856.1
Hypothetical protein.
       0.693
EDL57851.1
TPR/glycosyl transferase domain protein; COG0438 Glycosyltransferase.
       0.678
EDL57857.1
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.620
CysE_1
Acetyltransferase, CysE/LacA/LpxA/NodL family protein; COG1045 Serine acetyltransferase.
  
    0.560
EDL57849.1
Glycosyl transferase, group 2 family protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
       0.556
EDL57858.1
O-antigen polymerase family protein; COG0477 Permeases of the major facilitator superfamily.
       0.529
EDL57848.1
Hypothetical protein.
       0.479
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.