node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDL57871.1 | MnmE_1 | PM8797T_27547 | PM8797T_07022 | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.840 |
EDL57871.1 | RplQ | PM8797T_27547 | PM8797T_12318 | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | COG0203 Ribosomal protein L17. | 0.919 |
EDL57871.1 | RsfS | PM8797T_27547 | PM8797T_22178 | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein; COG0799 Uncharacterized homolog of plant Iojap protein. | 0.912 |
EDL57871.1 | rplC | PM8797T_27547 | PM8797T_12198 | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.911 |
EDL57871.1 | rplK | PM8797T_27547 | PM8797T_12131 | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.907 |
EDL57871.1 | rplM | PM8797T_27547 | PM8797T_04910 | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.934 |
EDL57871.1 | rplO | PM8797T_27547 | PM8797T_12283 | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.907 |
EDL57871.1 | rplU | PM8797T_27547 | PM8797T_06952 | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.908 |
EDL57871.1 | rplX | PM8797T_27547 | PM8797T_12253 | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Probable 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.907 |
EDL57871.1 | truD | PM8797T_27547 | PM8797T_09309 | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.913 |
MnmE_1 | EDL57871.1 | PM8797T_07022 | PM8797T_27547 | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | YacO; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.840 |
MnmE_1 | RplQ | PM8797T_07022 | PM8797T_12318 | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | COG0203 Ribosomal protein L17. | 0.899 |
MnmE_1 | RsfS | PM8797T_07022 | PM8797T_22178 | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Hypothetical protein; COG0799 Uncharacterized homolog of plant Iojap protein. | 0.899 |
MnmE_1 | rplC | PM8797T_07022 | PM8797T_12198 | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.852 |
MnmE_1 | rplK | PM8797T_07022 | PM8797T_12131 | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.903 |
MnmE_1 | rplM | PM8797T_07022 | PM8797T_04910 | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.905 |
MnmE_1 | rplO | PM8797T_07022 | PM8797T_12283 | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.924 |
MnmE_1 | rplU | PM8797T_07022 | PM8797T_06952 | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.905 |
MnmE_1 | rplX | PM8797T_07022 | PM8797T_12253 | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Probable 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.854 |
MnmE_1 | truD | PM8797T_07022 | PM8797T_09309 | tRNA modification GTPase; COG0486 Predicted GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.900 |