STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL62203.1Hypothetical protein. (876 aa)    
Predicted Functional Partners:
EDL62202.1
Hypothetical protein.
 
     0.922
TtrB
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 
 0.919
CtaD_2
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.877
CtaD_1
Cytochrome caa3 oxidase (subunit I); COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.877
CtaC_2
Cytochrome-c oxidase chain II/c precursor; COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
 
 0.835
CtaC_1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.835
EDL57392.1
COG4102 Uncharacterized protein conserved in bacteria.
 
     0.780
EDL61198.1
Hypothetical protein; COG3119 Arylsulfatase A and related enzymes.
  
     0.775
EDL61675.1
COG4102 Uncharacterized protein conserved in bacteria.
  
     0.775
EDL58532.1
COG4102 Uncharacterized protein conserved in bacteria.
  
     0.775
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.