STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YhaO_1COG0420 DNA repair exonuclease. (417 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.981
EDL62307.1
Hypothetical protein.
 
   0.957
EDL60079.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
 0.923
EDL60259.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
 0.923
EDL57551.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
 0.923
EDL61384.1
Hypothetical protein.
 
   0.793
RecQ
COG0514 Superfamily II DNA helicase.
  
 0.770
EDL55998.1
DNA helicase; COG0514 Superfamily II DNA helicase.
  
 0.770
DinG
ATP-dependent helicase, DinG family protein; COG1199 Rad3-related DNA helicases.
   
 0.750
EDL62309.1
Hypothetical protein.
       0.714
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.