STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL62368.1Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis. (286 aa)    
Predicted Functional Partners:
PimF
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.727
RfbE_2
3-beta hydroxysteroid dehydrogenase/isomerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
    0.725
RfbE_1
CDP-tyvelose epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
    0.686
EDL59614.1
Glycosyl transferase, group 2 family protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.611
EDL60234.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
0.522
EDL57890.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.476
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.