STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL59353.1Hypothetical protein; COG3385 FOG: Transposase and inactivated derivatives. (455 aa)    
Predicted Functional Partners:
EDL58753.1
Hypothetical protein.
  
     0.765
EDL61808.1
Hypothetical protein.
  
     0.761
EDL61183.1
Hypothetical protein; Belongs to the OprB family.
  
     0.752
EDL58657.1
Probable BatD; COG0457 FOG: TPR repeat.
  
     0.744
EDL59472.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.743
EDL61290.1
COG0845 Membrane-fusion protein.
  
     0.739
EDL58904.1
Probable transcription regulator MarR/EmrR family protein; COG1846 Transcriptional regulators.
  
     0.723
EDL57163.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
     0.709
EDL61019.1
Hypothetical protein.
  
     0.706
Blh_3
COG3453 Uncharacterized protein conserved in bacteria.
  
     0.699
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.