STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDL56318.1Hypothetical protein. (367 aa)    
Predicted Functional Partners:
IolA
Hypothetical protein; COG1012 NAD-dependent aldehyde dehydrogenases.
 
 
 
 0.924
QheDH
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
     0.775
EDL57271.1
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
     0.774
QbdA_2
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
     0.774
EDL59667.1
Probable serine/threonine protein kinase afsK; COG1520 FOG: WD40-like repeat.
  
     0.774
BamB_5
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
     0.774
BamB_4
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
     0.774
QbdA_1
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
     0.774
PvaA
Probable alcohol dehydrogenase (acceptor); COG1520 FOG: WD40-like repeat.
  
     0.773
EDL61711.1
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
     0.773
Your Current Organism:
Gimesia maris
NCBI taxonomy Id: 344747
Other names: G. maris DSM 8797, Gimesia maris DSM 8797, Planctomyces maris DSM 8797, Planctomyces maris str. DSM 8797, Planctomyces maris strain DSM 8797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.