STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVJ58_g10708Uncharacterized protein. (355 aa)    
Predicted Functional Partners:
EVJ58_g3604
G domain-containing protein.
   
 
 0.894
EVJ58_g9388
Peptidase_M24 domain-containing protein.
   
 
 0.878
EVJ58_g9544
Uncharacterized protein.
 
      0.817
EVJ58_g10494
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.795
EVJ58_g7582
Uncharacterized protein.
   
 
 0.795
EVJ58_g6886
TRASH domain-containing protein.
   
 
 0.744
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
   
 
 0.739
EVJ58_g7987
C2H2-type domain-containing protein.
   
 
 0.713
EVJ58_g8407
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
  0.712
EVJ58_g10643
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.687
Your Current Organism:
Fomitopsis rosea
NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus
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