STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVJ58_g7963Uncharacterized protein. (556 aa)    
Predicted Functional Partners:
EVJ58_g6038
Uncharacterized protein.
    
 0.973
EVJ58_g5166
Uncharacterized protein.
   
 0.960
EVJ58_g5714
Uncharacterized protein.
   
 0.923
EVJ58_g5984
Uncharacterized protein.
   
 0.919
EVJ58_g6957
Uncharacterized protein.
   
 0.894
EVJ58_g5772
Uncharacterized protein.
   
 0.894
EVJ58_g3167
Uncharacterized protein.
   
 0.894
EVJ58_g4166
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
 0.891
EVJ58_g8130
Uncharacterized protein.
    
 0.880
EVJ58_g5679
Uncharacterized protein.
    
 0.880
Your Current Organism:
Fomitopsis rosea
NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus
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