EVJ58_g6691 protein (Fomitopsis rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EVJ58_g6691

Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (544 aa)

Predicted Functional Partners:

EVJ58_g8696

0.845

EVJ58_g5060

0.833

EVJ58_g5928

0.813

EVJ58_g6082

0.807

EVJ58_g4649

0.807

EVJ58_g1971

0.807

EVJ58_g859

0.802

EVJ58_g509

0.801

EVJ58_g1552

0.800

EVJ58_g111

0.800

Your Current Organism:

Fomitopsis rosea

NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EVJ58_g111	EVJ58_g4649	A0A4Y9Z7B0	A0A4Y9YHZ8	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.870
EVJ58_g111	EVJ58_g5060	A0A4Y9Z7B0	A0A4Y9YFF1	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Uncharacterized protein.	0.400
EVJ58_g111	EVJ58_g6082	A0A4Y9Z7B0	A0A4Y9Y9R7	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Amidophosphoribosyltransferase.	0.726
EVJ58_g111	EVJ58_g6691	A0A4Y9Z7B0	A0A4Y9Y874	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.800
EVJ58_g111	EVJ58_g859	A0A4Y9Z7B0	A0A4Y9Z3Y4	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glutamine synthetase.	0.804
EVJ58_g111	EVJ58_g8696	A0A4Y9Z7B0	A0A4Y9XX43	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glutamine amidotransferase type-2 domain-containing protein.	0.886
EVJ58_g1552	EVJ58_g1971	A0A4Y9YYT7	A0A4Y9YV52	Uncharacterized protein.	Uncharacterized protein.	0.827
EVJ58_g1552	EVJ58_g4649	A0A4Y9YYT7	A0A4Y9YHZ8	Uncharacterized protein.	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.752
EVJ58_g1552	EVJ58_g5060	A0A4Y9YYT7	A0A4Y9YFF1	Uncharacterized protein.	Uncharacterized protein.	0.856
EVJ58_g1552	EVJ58_g5928	A0A4Y9YYT7	A0A4Y9Y9E9	Uncharacterized protein.	Uncharacterized protein.	0.847
EVJ58_g1552	EVJ58_g6082	A0A4Y9YYT7	A0A4Y9Y9R7	Uncharacterized protein.	Amidophosphoribosyltransferase.	0.953
EVJ58_g1552	EVJ58_g6691	A0A4Y9YYT7	A0A4Y9Y874	Uncharacterized protein.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.800
EVJ58_g1552	EVJ58_g859	A0A4Y9YYT7	A0A4Y9Z3Y4	Uncharacterized protein.	Glutamine synthetase.	0.810
EVJ58_g1552	EVJ58_g8696	A0A4Y9YYT7	A0A4Y9XX43	Uncharacterized protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.846
EVJ58_g1971	EVJ58_g1552	A0A4Y9YV52	A0A4Y9YYT7	Uncharacterized protein.	Uncharacterized protein.	0.827
EVJ58_g1971	EVJ58_g4649	A0A4Y9YV52	A0A4Y9YHZ8	Uncharacterized protein.	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.745
EVJ58_g1971	EVJ58_g5060	A0A4Y9YV52	A0A4Y9YFF1	Uncharacterized protein.	Uncharacterized protein.	0.856
EVJ58_g1971	EVJ58_g5928	A0A4Y9YV52	A0A4Y9Y9E9	Uncharacterized protein.	Uncharacterized protein.	0.847
EVJ58_g1971	EVJ58_g6082	A0A4Y9YV52	A0A4Y9Y9R7	Uncharacterized protein.	Amidophosphoribosyltransferase.	0.952
EVJ58_g1971	EVJ58_g6691	A0A4Y9YV52	A0A4Y9Y874	Uncharacterized protein.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.807