EVJ58_g5854 protein (Fomitopsis rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EVJ58_g5854

Uncharacterized protein. (480 aa)

Predicted Functional Partners:

EVJ58_g393

0.975

EVJ58_g1079

0.914

EVJ58_g4676

0.891

EVJ58_g9335

0.747

EVJ58_g634

0.723

EVJ58_g6931

0.704

EVJ58_g6645

0.663

EVJ58_g6473

0.654

EVJ58_g8156

0.652

EVJ58_g3479

0.611

Your Current Organism:

Fomitopsis rosea

NCBI taxonomy Id: 34475
Other names: Boletus roseus, CFMR:RLG-6954, F. rosea, Rhodofomes roseus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EVJ58_g1079	EVJ58_g393	A0A4Y9Z103	A0A4Y9Z7W4	Uncharacterized protein; Belongs to the complex I LYR family.	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.998
EVJ58_g1079	EVJ58_g4676	A0A4Y9Z103	A0A4Y9YJQ4	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.850
EVJ58_g1079	EVJ58_g5854	A0A4Y9Z103	A0A4Y9YCX9	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.914
EVJ58_g1079	EVJ58_g6645	A0A4Y9Z103	A0A4Y9Y903	Uncharacterized protein; Belongs to the complex I LYR family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.948
EVJ58_g1079	EVJ58_g6931	A0A4Y9Z103	A0A4Y9Y6R4	Uncharacterized protein; Belongs to the complex I LYR family.	Fe-S_biosyn domain-containing protein.	0.482
EVJ58_g1079	EVJ58_g8156	A0A4Y9Z103	A0A4Y9Y0Z0	Uncharacterized protein; Belongs to the complex I LYR family.	J domain-containing protein.	0.471
EVJ58_g3479	EVJ58_g5854	A0A4Y9YNF3	A0A4Y9YCX9	ThiF domain-containing protein.	Uncharacterized protein.	0.611
EVJ58_g3479	EVJ58_g634	A0A4Y9YNF3	A0A4Y9Z5I1	ThiF domain-containing protein.	Rhodanese domain-containing protein.	0.798
EVJ58_g3479	EVJ58_g9335	A0A4Y9YNF3	A0A4Y9XU32	ThiF domain-containing protein.	Rhodanese domain-containing protein.	0.635
EVJ58_g393	EVJ58_g1079	A0A4Y9Z7W4	A0A4Y9Z103	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Uncharacterized protein; Belongs to the complex I LYR family.	0.998
EVJ58_g393	EVJ58_g4676	A0A4Y9Z7W4	A0A4Y9YJQ4	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Uncharacterized protein.	0.968
EVJ58_g393	EVJ58_g5854	A0A4Y9Z7W4	A0A4Y9YCX9	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Uncharacterized protein.	0.975
EVJ58_g393	EVJ58_g634	A0A4Y9Z7W4	A0A4Y9Z5I1	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Rhodanese domain-containing protein.	0.831
EVJ58_g393	EVJ58_g6645	A0A4Y9Z7W4	A0A4Y9Y903	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.539
EVJ58_g393	EVJ58_g6931	A0A4Y9Z7W4	A0A4Y9Y6R4	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Fe-S_biosyn domain-containing protein.	0.952
EVJ58_g393	EVJ58_g8156	A0A4Y9Z7W4	A0A4Y9Y0Z0	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	J domain-containing protein.	0.996
EVJ58_g393	EVJ58_g9335	A0A4Y9Z7W4	A0A4Y9XU32	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Rhodanese domain-containing protein.	0.435
EVJ58_g4676	EVJ58_g1079	A0A4Y9YJQ4	A0A4Y9Z103	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.850
EVJ58_g4676	EVJ58_g393	A0A4Y9YJQ4	A0A4Y9Z7W4	Uncharacterized protein.	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.968
EVJ58_g4676	EVJ58_g5854	A0A4Y9YJQ4	A0A4Y9YCX9	Uncharacterized protein.	Uncharacterized protein.	0.891